General software and libraries (Fimm)

From HPC documentation portal
Revision as of 10:29, 21 May 2015 by Helge Opedal (Talk | contribs) (13 revisions)

(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

How to use software

All common software are installed under /local/ folder. One can use following command to check what kind of software are available on fimm:

module av 

Most of the software are compiled with three different compiler(gnu,gcc,pgi ), when you load specific module as  :

 module load xxxxx

Based on the compiler which is loaded in the your environment, module command will find correct version of the software and load it to you environment

Application software by discipline:

Bio-informatics

hammer

mrbayes

viennaRNA

RNAz

Geo-physics

Mathematics

Mathematica

Matlab-2009a

Matlab-2008b

Chemistry

Gaussian09 http://www.gaussian.com/g_tech/g_ur/g09help.htm

Gaussian03

ADF 2010.01 http://www.scm.com/Doc/Doc2010/